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Pumpkin Protein Muffins (High Protein, Fall Favorite)

pumpkin protein muffins for diabetes on cutting board

Whip up these delicious pumpkin protein muffins. They’re high in protein, low in sugar, and perfect for a healthy fall breakfast or snack.

A Fall Favorite with a Nutritious Twist

Pumpkin season is officially here! While coffee shops are filled with sugary lattes and pastries, there is a way to enjoy delicious seasonal flavors without all the extra sugar. Enter: Pumpkin Protein Muffins.

These muffins are perfect for breakfast on-the-go, a post-workout snack, or even as a healthier option for fall gatherings. Pair one with your favorite yogurt or smoothie and you’re good to go!

They’re gluten-free, lower in sugar, and can even be customized with your favorite add-ins like nuts or chocolate chips. AND, we use the whole 15oz can of pumpkin! No more having to figure out what to do with the leftover pumpkin puree. 

Why Pumpkin Protein Muffins Work

Pumpkin is more than just a seasonal flavor… it’s a nutritional powerhouse. Packed with fiber, beta-carotene, and antioxidants, pumpkin supports healthy digestion and overall wellness. When combined with protein powder, eggs, almond flour, and oats, these muffins transform into a balanced snack or breakfast that helps keep you full and energized.

Unlike typical bakery muffins with more sugar and refined flour, this recipe uses:

  • Protein powder to increase protein content. This helps keep you full and promotes better energy levels and more stable blood sugars after eating.
  • Almond four and oats to increase the fiber and protein content… and decrease total carbohydrate.
  • Coconut sugar to sweeten our muffins perfectly. While it is still a sugar, it contains more fiber and antioxidants than refined sugar. 
pumpkin protein muffins

Tips for the Best Pumpkin Protein Muffins

  • Protein Powder Matters: Use a good-quality vanilla protein powder. Plant-based powders may yield a denser texture, while whey gives a fluffier result. Check out some of my favorite protein powders for people with diabetes here.
  • Customize Sweetness: If you’re aiming for very low sugar, swap coconut sugar for a no-sugar sweetener of your choice.
  • Add Texture: Sprinkle pumpkin seeds on top before baking for a crunchy finish, or add some no added sugar chocolate chips into your batter before scooping it into your muffin pan.
  • Make Ahead: These muffins freeze beautifully… perfect for meal prepping fall snacks.

Why You’ll Love These Muffins

These muffins strike the perfect balance between cozy comfort food and smart nutrition. Instead of the sugar crash from traditional pumpkin bread or muffins, you’ll get sustained energy from the mix of healthy fat, fiber, and protein.

They’re great for:

  • Breakfast on the go: Pair with your favorite yogurt for a balanced start to your day.
  • Post-workout snack: Re-fuel with protein and carbs.
  • Healthy fall treat: Enjoy the flavors of the season without sending your blood sugars soaring!

Whether you enjoy them fresh from the oven or stash a few in the freezer for busy mornings, these muffins will quickly become a seasonal favorite.

So, grab a can of pumpkin, some protein powder, and a muffin pan, and let’s bake some pumpkin protein muffins that are equally nutritious and tasty. 

pumpkin protein muffins for diabetes on cutting board
Whip up these delicious pumpkin protein muffins. They're high in protein, low in sugar, and perfect for a healthy fall breakfast or snack.
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5 from 1 vote
Prep Time: 15 minutes
Cook Time: 25 minutes
Course: Breakfast, Snack
Cuisine: American
Diet: Diabetic, Gluten Free
Servings: 12 muffins
Carbohydrates: 20g

Ingredients

  • 1 15oz can pumpkin purée not pumpkin pie filling
  • 3 large eggs
  • 1/4 cup unsalted butter melted
  • 2 tsp vanilla extract
  • 1/2 cup coconut sugar or sugar replacement
  • 1 1/2 cups almond flour
  • 1 cup oats ground
  • 1/2 cup low/no sugar vanilla protein powder
  • 1 tsp baking soda
  • 1 tsp baking powder
  • 2 tsp ground cinnamon
  • 1/2 tsp ground nutmeg
  • 1/2 tsp ground ginger
  • 1/4 tsp ground cloves
  • 1/4 tsp salt

Instructions

  • Preheat your oven to 350°F (175°C). Line a muffin pan with liners or lightly grease it with. oil.
  • Mix your wet ingredients in a large bowl using a whisk: pumpkin puree, eggs, melted butter, and vanilla extract.
  • In another bowl, combine the coconut sugar, almond flour, ground oats, protein powder, baking soda, baking powder, spices, and salt and mix to combine.
  • Add the dry mixture to the wet mixture. Stir until just combined. Do not overmix. Fold in optional add-ins if desired.
  • Divide the batter evenly among 12 muffin cups. Bake for 22-25 minutes, or until a toothpick inserted in the center comes out clean.
  • Let the muffins cool in the pan for 5 minutes, then transfer to a wire rack.

Notes

Optional add-ins: 1/4 cup chopped pecans, walnuts, or sugar-free chocolate chips.
The nutrition facts presented here are estimates only. The brands you use and product types chosen can change the nutritional information presented. To obtain the most accurate nutritional information, you should calculate the nutritional information with the actual ingredients you use.

Nutrition

Serving: 1muffin | Calories: 240kcal | Carbohydrates: 20g | Protein: 14g | Fat: 12g | Saturated Fat: 4g | Cholesterol: 78mg | Sodium: 85mg | Fiber: 4g | Sugar: 10g
Tried this recipe?Mention @milknhoneynutrition or tag #milknhoneynutrition!

More diabetes friendly fall recipes

Looking for more fall recipe inspiration that won’t send your blood sugars soaring? Check out these recipes…

Low Carb Pumpkin Spice Latte

healthy pumpkin spice latte in glass mug
Low Carb Healthy Pumpkin Spice Latte
My healthy pumpkin spice latte is ideal for someone with diabetes or anyone looking for a lower sugar version of this classic fall beverage. And, you don’t even need an espresso maker to make it at home!
Serving: 1latte | Calories: 75kcal | Carbohydrates: 11g | Protein: 1g | Fat: 3g | Saturated Fat: 1g | Sodium: 170mg | Fiber: 4g | Sugar: 0g
View Recipe

Fall Harvest Salad

harvest salad with butternut squash grapes goat cheese and pecans
Fall Harvest Salad with Grapes, Squash & Maple Apple Cider Vinaigrette
We all have our favorite fall recipes, and mine is definitely this hearty fall harvest salad!
Serving: 1salad | Calories: 431kcal | Carbohydrates: 37g | Protein: 12g | Fat: 29g | Saturated Fat: 7g | Sodium: 430mg | Fiber: 5g | Sugar: 18g
View Recipe

Roasted Veggies with Pecans

Harvest Sheet‑Pan Dinner Chicken Apple Sausage, Butternut, Brussels Sprouts, Pecans
Harvest Sheet Pan Dinner (Chicken Apple Sausage, Butternut Squash, Brussels Sprouts, Pecans)
This diabetes friendly harvest sheet pan dinner is a healthy fall meal featuring maple-roasted butternut squash, brussel sprouts, and chicken apple sausage.
Serving: 1serving | Calories: 385kcal | Carbohydrates: 38g | Protein: 15g | Fat: 21g | Saturated Fat: 4.5g | Sodium: 586mg | Fiber: 6g | Sugar: 8g
View Recipe

Sources

  1. Pumpkin, canned, without salt. USDA FoodData Central.
  2. From Inflammation to Heart Health: The perks of pumpkin in your diet, Mayo Clinic Health System.

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One Response

  1. 5 stars
    Great combination of flavors, easy to make (I used a silicone muffin pan), and MOIST even days later. (I made in advance and had them for breakfast on-the-go.) The lightness of the almond flour makes the difference. Will be in my regular rotation!

5 from 1 vote

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